Showing posts with label Information theory. Show all posts
Showing posts with label Information theory. Show all posts

Friday, September 19, 2014

Evolution Professor: Origin of Life “Not Impossible”

Turning Science Into Speculation

It’s not that speculation about flexible, cartoon hypotheses that are religiously motivated, supposed to have occurred long ago and are not falsifiable is wrong. But we shouldn’t confuse it with science. To wit, evolutionist Christoph Adami’s latest work skips those annoying scientific details and instead takes a high-level view of the origin of life:

Christoph Adami of Michigan State University in East Lansing decided to study the origin of life purely in terms of information theory, so he could ignore the chemistry involved. He assumed that molecules must exceed a certain length in order to have enough information to self-replicate. These long molecules are made from different kinds of short molecules, called monomers.

Adami calculates that if you start with an equal number of each type of monomer, the odds of getting a self-replicating molecule are very low. But if you adjust the distribution of monomers in the environment to match the distribution within a potential self-replicator, the chances improve by many orders of magnitude. It's a bit like hammering randomly on a keyboard on which the most frequently used letters are proportionally larger – your odds of accidentally typing a word are much better than the famous infinite monkeys banging on typewriters.

And by skipping those details, you can always get the right answer:

Once a self-replicator emerges at random, evolution can start improving its abilities. "You only have to make this very first step, where you are getting some crappy replicator," says Adami. "The moment evolution can actually work with it, you're done."

That was easy. And like the multiverse, it’s not impossible:

We have no idea what the distribution of monomers was like on early Earth, but Adami says studies show meteorites contain an unequal distribution of monomers approaching what you might need for life. "It is not impossible that basic self-replicators cooked up on some meteor and ended up contaminating Earth."

But that is only because it is not falsifiable.

Don Johnson: It’s All About Information

Let’s Get Back to the Science



Don Johnson, with Ph.Ds in Chemistry and Computer & Information Sciences, was certain that evolution was a fact until he realized that evolutionary theory had gone beyond the science. Watch this terrific video to see the role of information in molecular biology.

Thursday, September 18, 2014

Lee Spetner: The Evolution Revolution

A New (and Much Better) Way of Doing Science

I just received my copy of Lee Spetner’s new book, The Evolution Revolution which follows his earlier Not By Chance! In these books Spetner lays out a new theory of origins, a new way of looking at biology, and really a new way of doing science, at least in the life sciences. I couldn’t agree more with his approach. Spetner’s overarching point is not that evolution does not occur, but that it is very different from how we normally understand that word. Spetner’s new approach—which he calls the nonrandom evolutionary hypothesis (NREH)—is data driven. NREH is an empirical idea, based on observations, not a rationalist idea based on a priori axioms. Mutations are effective, not random; evolution is directed to the need, not undirected; evolution occurs rapidly not slowly; and evolution occurs at the level of the individual, not at the population level. All of this points to the conclusion that evolution, like physiological responses, is a built-in capability, not a default, external process. And as Spetner points out, as research increases, the case for NREH is just getting stronger:

When I proposed my nonrandom evolutionary hypothesis (NREH) about fifteen years ago in my book Not By Chance!, the suggestion—that environmental inputs could affect the genome, leading to the possibility that an organism can change its physiology and behavior in response to an external input—was somewhat sketchy. A distinguishing feature of a good theory is that evidence for it grows after it has been formulated. Since I suggested the NREH, the following discoveries have been made that provide a solid mechanism for it, showing how organisms can show an adaptive heritable response to environmental inputs: … [63]

Bravo for Lee Spetner. Let’s bring science back to its rightful role of figuring out how nature works rather than promoting religious dogma. Rather than battle with new findings as evolution is forced to do, Spetner shows us how we can make progress with science, advancing with new findings rather than adding new epicycles with each new study.

Monday, January 14, 2013

Trending: Evolution’s Information Technology

What Next?

Art may not imitate life but evolution certainly does. Once the leading edge in biology was breeding and so evolution was cast as a natural breeder. Now the state of the art is genetic engineering and, so, evolution is cast as a natural genetic engineer. And of course the unquestionable trending topic of our time is Information Technology. Just check the employment pages. Do you know Networking, Epic, SAN Citrix, Notes, NextGen, BES, Android, VMware, TCPIP, UNIX, Windows, Active Directory, EMC, Peoplesoft, iPhone, iPad, LANWAN, blade, VoIP, CAT5 and Avaya? If so then you’re trending. And so is evolution. After all, as Matt Ridley explained, “it’s from information technology.” Or as Paul Davies writes this week, “Life's origins may only be explained through a study of its unique management of information.” And Emory University evolutionists are now telling us that chemical evolution includes the “capture, mutation, and propagation of molecular information.” And within Information Technology the trending term is “network,” and so it is with evolution as well:

Chemical evolution includes the capture, mutation, and propagation of molecular information and can be manifested as coordinated chemical networks that adapt to environmental change. The robustness of a chemical network depends on the diversity of its membership, which establishes the probability for the successful selection of superior chemical species and populations. A dynamic exchange of network component structures and assemblies, via both covalent and noncovalent associations, is fundamental for the network’s ability to learn, to capture and integrate information about an environment that ensures the network’s future response to similar conditions, as an inherent part of chemical evolution.

For as one evolutionist has explained, “Molecular cell biology has uncovered sophisticated networks in all organisms.”

If this doesn’t exactly strike you as the stuff of random mutations, consider the most recent evolutionary epicycle, molecular intelligence:

These diverse approaches to deconvolution and reintegration of the origins of the cell, projected in collaboration through the lens of chemical evolution, suggest a remarkable degree of intrinsic molecular intelligence that guide the bottom-up emergence of living matter. … A population of simple molecules, storing and copying information to ensure their own survival prebiotically, argues that intelligent behavior is not restricted to complex genomes but is an inherent property of matter. Darwin’s hypothesis further predicts the emergence of new intelligent materials, ones not limited to what can be deduced from biology’s “archeological” remnants but even more diverse and exotic realms of dynamic chemical systems that might never have been explored by extant biochemistry.

Molecular intelligence, networks, platforms for molecular information, management of information, information technology?

Does evolution also know VMware and TCPIP?

Why is it that evolution follows whatever is trending? Could it be that evolution, rather than uncovering new and remarkable truths about nature, is actually a cultural construct, meeting our needs and expectations for an origins narrative? Could it be that rather than creating life, evolution imitates life? Just Sayin’

Tuesday, August 28, 2012

William Dembski on the Conservation of Information

If you have ever wondered how information theory relates to evolution but found the topic too complicated, then William Dembski’s latest explanation of the concept of the conservation of information might be just for you. As Dembski explains in his introduction:

In this article, I'm going to follow the example of these books, laying out as simply and clearly as I can what conservation of information is and why it poses a challenge to conventional evolutionary thinking. I'll break this concept down so that it seems natural and straightforward. Right now, it's too easy for critics of intelligent design to say, "Oh, that conservation of information stuff is just mumbo-jumbo. It's part of the ID agenda to make a gullible public think there's some science backing ID when it's really all smoke and mirrors." Conservation of information is not a difficult concept and once it is understood, it becomes clear that evolutionary processes cannot create the information required to power biological evolution.

There is no debate that biological designs are astronomically unlikely. Evolutionary theory addresses this with its concept of natural selection. Yes the species and mechanisms we observe are intricate, but of all the randomly occurring designs that happen to arise, those that contribute to fitness will reproduce more often. And so the evolutionary process is not random, but directed.

This is, simply put, how evolution creates nature’s exquisite designs. But does this explanation really work? The conservation of information suggests there is more to the story. As Dembski concludes:

This is the relevance of conservation of information for evolution: it shows that the vast improbabilities that evolution is supposed to mitigate in fact never do get mitigated. Yes, you can reach the top of Mount Improbable, but the tools that enable you to find a gradual ascent up the mountain are as improbably acquired as simply scaling it in one fell swoop. This is the lesson of conservation of information.

Regardless of where you stand this latest contribution from Dembski is well worth a read.